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org.obolibrary.oboformat.model.Xref.()方法的使用及代码示例

转载 作者:知者 更新时间:2024-03-19 09:10:40 29 4
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本文整理了Java中org.obolibrary.oboformat.model.Xref.<init>()方法的一些代码示例,展示了Xref.<init>()的具体用法。这些代码示例主要来源于Github/Stackoverflow/Maven等平台,是从一些精选项目中提取出来的代码,具有较强的参考意义,能在一定程度帮忙到你。Xref.<init>()方法的具体详情如下:
包路径:org.obolibrary.oboformat.model.Xref
类名称:Xref
方法名:<init>

Xref.<init>介绍

暂无

代码示例

代码示例来源:origin: owlcs/owlapi

private boolean parseDirectXref(Clause cl) {
  parseZeroOrMoreWs();
  String id = getParseUntil("\",]!{", true);
  id = id.trim();
  if (id.contains(" ")) {
    warn("accepting bad xref with spaces:<" + id + '>');
  }
  id = id.replaceAll(" +\\Z", "");
  Xref xref = new Xref(id);
  cl.addValue(xref);
  parseZeroOrMoreWs();
  if (stream.peekCharIs('"')) {
    stream.consume("\"");
    xref.setAnnotation(getParseUntilAdv("\""));
  }
  return true;
}

代码示例来源:origin: net.sourceforge.owlapi/owlapi-distribution

private boolean parseDirectXref(Clause cl) {
  parseZeroOrMoreWs();
  String id = getParseUntil("\",]!{", true);
  id = id.trim();
  if (id.contains(" ")) {
    warn("accepting bad xref with spaces:<" + id + '>');
  }
  id = id.replaceAll(" +\\Z", "");
  Xref xref = new Xref(id);
  cl.addValue(xref);
  parseZeroOrMoreWs();
  if (stream.peekCharIs('"')) {
    stream.consume("\"");
    xref.setAnnotation(getParseUntilAdv("\""));
  }
  return true;
}

代码示例来源:origin: net.sourceforge.owlapi/owlapi-osgidistribution

private boolean parseDirectXref(Clause cl) {
  parseZeroOrMoreWs();
  String id = getParseUntil("\",]!{", true);
  id = id.trim();
  if (id.contains(" ")) {
    warn("accepting bad xref with spaces:<" + id + '>');
  }
  id = id.replaceAll(" +\\Z", "");
  Xref xref = new Xref(id);
  cl.addValue(xref);
  parseZeroOrMoreWs();
  if (stream.peekCharIs('"')) {
    stream.consume("\"");
    xref.setAnnotation(getParseUntilAdv("\""));
  }
  return true;
}

代码示例来源:origin: net.sourceforge.owlapi/owlapi-oboformat

private boolean parseDirectXref(Clause cl) {
  parseZeroOrMoreWs();
  String id = getParseUntil("\",]!{", true);
  id = id.trim();
  if (id.contains(" ")) {
    warn("accepting bad xref with spaces:<" + id + '>');
  }
  id = id.replaceAll(" +\\Z", "");
  Xref xref = new Xref(id);
  cl.addValue(xref);
  parseZeroOrMoreWs();
  if (stream.peekCharIs('"')) {
    stream.consume("\"");
    xref.setAnnotation(getParseUntilAdv("\""));
  }
  return true;
}

代码示例来源:origin: net.sourceforge.owlapi/oboformat-included-owlapi

private boolean parseDirectXref(Clause cl) {
  parseZeroOrMoreWs();
  String id = getParseUntil("\",]!{", true);
  if (id != null) {
    id = id.trim();
    if (id.contains(" ")) {
      warn("accepting bad xref with spaces:<"+id+">");
    }
    id = id.replaceAll(" +\\Z", "");
    Xref xref = new Xref(id);
    cl.addValue(xref);
    parseZeroOrMoreWs();
    if (s.peekCharIs('"')) {
      s.consume("\"");
      xref.setAnnotation(getParseUntilAdv("\""));
    }
    return true;
  }
  return false;
}

代码示例来源:origin: owlcs/owlapi

xrefValue = ((OWLLiteral) v).getLiteral();
Xref xref = new Xref(xrefValue);
clause.addXref(xref);
unprocessedQualifiers.remove(aan);

代码示例来源:origin: owlcs/owlapi

private boolean parseXref(Clause cl) {
  parseZeroOrMoreWs();
  String id = getParseUntil("\",]!{", true);
  if (!id.isEmpty()) {
    id = removeTrailingWS(id);
    if (id.contains(" ")) {
      warn("accepting bad xref with spaces:" + id);
    }
    Xref xref = new Xref(id);
    cl.addXref(xref);
    parseZeroOrMoreWs();
    if (stream.peekCharIs('"')) {
      stream.consume("\"");
      xref.setAnnotation(getParseUntilAdv("\""));
    }
    return true;
  }
  return false;
}

代码示例来源:origin: net.sourceforge.owlapi/owlapi-oboformat

private boolean parseXref(Clause cl) {
  parseZeroOrMoreWs();
  String id = getParseUntil("\",]!{", true);
  if (!id.isEmpty()) {
    id = removeTrailingWS(id);
    if (id.contains(" ")) {
      warn("accepting bad xref with spaces:" + id);
    }
    Xref xref = new Xref(id);
    cl.addXref(xref);
    parseZeroOrMoreWs();
    if (stream.peekCharIs('"')) {
      stream.consume("\"");
      xref.setAnnotation(getParseUntilAdv("\""));
    }
    return true;
  }
  return false;
}

代码示例来源:origin: net.sourceforge.owlapi/oboformat-included-owlapi

private void handleSynonym(Set<OWLAnnotation> qualifiers, String scope,
    Clause clause, Set<OWLAnnotation> unprocessedQualifiers) 
{
  clause.setTag(OboFormatTag.TAG_SYNONYM.getTag());
  String type = null;
  clause.setXrefs(new Vector<Xref>());
  for(OWLAnnotation aan: qualifiers){
    String propId = owlObjectToTag(aan.getProperty());
    if(OboFormatTag.TAG_XREF.getTag().equals(propId)){
      String xrefValue = ((OWLLiteral) aan.getValue()).getLiteral();
      Xref xref = new Xref(xrefValue);
      clause.addXref(xref);
      unprocessedQualifiers.remove(aan);
    }else if(OboFormatTag.TAG_HAS_SYNONYM_TYPE.getTag().equals(propId)){
      type = getIdentifier(aan.getValue());
      unprocessedQualifiers.remove(aan);
    }
  }
  if(scope != null){
    clause.addValue(scope);
    if(type != null){
      clause.addValue(type);
    }
  }
}

代码示例来源:origin: net.sourceforge.owlapi/owlapi-distribution

private boolean parseXref(Clause cl) {
  parseZeroOrMoreWs();
  String id = getParseUntil("\",]!{", true);
  if (!id.isEmpty()) {
    id = removeTrailingWS(id);
    if (id.contains(" ")) {
      warn("accepting bad xref with spaces:" + id);
    }
    Xref xref = new Xref(id);
    cl.addXref(xref);
    parseZeroOrMoreWs();
    if (stream.peekCharIs('"')) {
      stream.consume("\"");
      xref.setAnnotation(getParseUntilAdv("\""));
    }
    return true;
  }
  return false;
}

代码示例来源:origin: net.sourceforge.owlapi/owlapi-osgidistribution

private boolean parseXref(Clause cl) {
  parseZeroOrMoreWs();
  String id = getParseUntil("\",]!{", true);
  if (!id.isEmpty()) {
    id = removeTrailingWS(id);
    if (id.contains(" ")) {
      warn("accepting bad xref with spaces:" + id);
    }
    Xref xref = new Xref(id);
    cl.addXref(xref);
    parseZeroOrMoreWs();
    if (stream.peekCharIs('"')) {
      stream.consume("\"");
      xref.setAnnotation(getParseUntilAdv("\""));
    }
    return true;
  }
  return false;
}

代码示例来源:origin: net.sourceforge.owlapi/owlapi-distribution

xrefValue = ((OWLLiteral) v).getLiteral();
Xref xref = new Xref(xrefValue);
clause.addXref(xref);
unprocessedQualifiers.remove(aan);

代码示例来源:origin: net.sourceforge.owlapi/owlapi-osgidistribution

xrefValue = ((OWLLiteral) v).getLiteral();
Xref xref = new Xref(xrefValue);
clause.addXref(xref);
unprocessedQualifiers.remove(aan);

代码示例来源:origin: net.sourceforge.owlapi/oboformat-included-owlapi

private boolean parseXref(Clause cl) {
  parseZeroOrMoreWs();
  String id = getParseUntil("\",]!{", true);
  if (id != null && !id.equals("")) {
    id = removeTrailingWS(id);
    if (id.contains(" ")) {
      warn("accepting bad xref with spaces:"+id);
    }
    Xref xref = new Xref(id);
    cl.addXref(xref);
    parseZeroOrMoreWs();
    if (s.peekCharIs('"')) {
      s.consume("\"");
      xref.setAnnotation(getParseUntilAdv("\""));
    }
    return true;
  }
  return false;
}

代码示例来源:origin: net.sourceforge.owlapi/owlapi-oboformat

xrefValue = ((OWLLiteral) v).getLiteral();
Xref xref = new Xref(xrefValue);
clause.addXref(xref);
unprocessedQualifiers.remove(aan);

代码示例来源:origin: owlcs/owlapi

xrefValue = ((OWLLiteral) v).getLiteral();
    Xref xref = new Xref(xrefValue);
    clause.addXref(xref);
    unprocessedQualifiers.remove(aan);
Xref xref = new Xref(value.toString());
for (OWLAnnotation annotation : qualifiers) {
  if (df.getRDFSLabel().equals(annotation.getProperty())) {

代码示例来源:origin: net.sourceforge.owlapi/owlapi-distribution

xrefValue = ((OWLLiteral) v).getLiteral();
    Xref xref = new Xref(xrefValue);
    clause.addXref(xref);
    unprocessedQualifiers.remove(aan);
Xref xref = new Xref(value.toString());
for (OWLAnnotation annotation : qualifiers) {
  if (df.getRDFSLabel().equals(annotation.getProperty())) {

代码示例来源:origin: net.sourceforge.owlapi/owlapi-osgidistribution

xrefValue = ((OWLLiteral) v).getLiteral();
    Xref xref = new Xref(xrefValue);
    clause.addXref(xref);
    unprocessedQualifiers.remove(aan);
Xref xref = new Xref(value.toString());
for (OWLAnnotation annotation : qualifiers) {
  if (df.getRDFSLabel().equals(annotation.getProperty())) {

代码示例来源:origin: net.sourceforge.owlapi/owlapi-oboformat

xrefValue = ((OWLLiteral) v).getLiteral();
    Xref xref = new Xref(xrefValue);
    clause.addXref(xref);
    unprocessedQualifiers.remove(aan);
Xref xref = new Xref(value.toString());
for (OWLAnnotation annotation : qualifiers) {
  if (df.getRDFSLabel().equals(annotation.getProperty())) {

代码示例来源:origin: net.sourceforge.owlapi/oboformat-included-owlapi

if("xref".equals(propId)){
    String xrefValue = ((OWLLiteral) aan.getValue()).getLiteral();
    Xref xref = new Xref(xrefValue);
    clause.addXref(xref);
    unprocessedQualifiers.remove(aan);
Xref xref = new Xref(value);
for(OWLAnnotation annotation : qualifiers) {
  if (fac.getRDFSLabel().equals(annotation.getProperty())) {

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