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本文整理了Java中org.obolibrary.oboformat.model.Xref.getAnnotation()
方法的一些代码示例,展示了Xref.getAnnotation()
的具体用法。这些代码示例主要来源于Github
/Stackoverflow
/Maven
等平台,是从一些精选项目中提取出来的代码,具有较强的参考意义,能在一定程度帮忙到你。Xref.getAnnotation()
方法的具体详情如下:
包路径:org.obolibrary.oboformat.model.Xref
类名称:Xref
方法名:getAnnotation
暂无
代码示例来源:origin: owlcs/owlapi
/**
* @param obj the obj
* @return toString representation
*/
private static String toStringRepresentation(@Nullable Object obj) {
if (obj == null) {
return "";
}
if (obj instanceof Xref) {
Xref xref = (Xref) obj;
return xref.getIdref() + ' ' + xref.getAnnotation();
}
if (obj instanceof String) {
return (String) obj;
}
return obj.toString();
}
代码示例来源:origin: net.sourceforge.owlapi/owlapi-distribution
/**
* @param obj the obj
* @return toString representation
*/
private static String toStringRepresentation(@Nullable Object obj) {
if (obj == null) {
return "";
}
if (obj instanceof Xref) {
Xref xref = (Xref) obj;
return xref.getIdref() + ' ' + xref.getAnnotation();
}
if (obj instanceof String) {
return (String) obj;
}
return obj.toString();
}
代码示例来源:origin: net.sourceforge.owlapi/owlapi-osgidistribution
/**
* @param obj the obj
* @return toString representation
*/
private static String toStringRepresentation(@Nullable Object obj) {
if (obj == null) {
return "";
}
if (obj instanceof Xref) {
Xref xref = (Xref) obj;
return xref.getIdref() + ' ' + xref.getAnnotation();
}
if (obj instanceof String) {
return (String) obj;
}
return obj.toString();
}
代码示例来源:origin: net.sourceforge.owlapi/oboformat-included-owlapi
private String toStringRepresentation(Object obj) {
String s = null;
if (obj != null) {
if (obj instanceof Xref) {
Xref xref = (Xref) obj;
s = xref.getIdref()+" "+xref.getAnnotation();
}
else if (obj instanceof String) {
s = (String) obj;
}
else {
s = obj.toString();
}
}
return s;
}
}
代码示例来源:origin: net.sourceforge.owlapi/owlapi-oboformat
/**
* @param obj the obj
* @return toString representation
*/
private static String toStringRepresentation(@Nullable Object obj) {
if (obj == null) {
return "";
}
if (obj instanceof Xref) {
Xref xref = (Xref) obj;
return xref.getIdref() + ' ' + xref.getAnnotation();
}
if (obj instanceof String) {
return (String) obj;
}
return obj.toString();
}
代码示例来源:origin: owlcs/owlapi
private static void appendXrefs(StringBuilder sb, Collection<Xref> xrefs) {
List<Xref> sortedXrefs = new ArrayList<>(xrefs);
Collections.sort(sortedXrefs, XrefComparator.INSTANCE);
sb.append(" [");
Iterator<Xref> xrefsIterator = sortedXrefs.iterator();
while (xrefsIterator.hasNext()) {
Xref current = xrefsIterator.next();
String idref = current.getIdref();
int colonPos = idref.indexOf(':');
if (colonPos > 0) {
sb.append(escapeOboString(idref.substring(0, colonPos), EscapeMode.XREFLIST));
sb.append(':');
sb.append(escapeOboString(idref.substring(colonPos + 1), EscapeMode.XREFLIST));
} else {
sb.append(escapeOboString(idref, EscapeMode.XREFLIST));
}
String annotation = current.getAnnotation();
if (annotation != null) {
sb.append(' ');
sb.append('"');
sb.append(escapeOboString(annotation, EscapeMode.QUOTES));
sb.append('"');
}
if (xrefsIterator.hasNext()) {
sb.append(", ");
}
}
sb.append(']');
}
代码示例来源:origin: net.sourceforge.owlapi/owlapi-distribution
private static void appendXrefs(StringBuilder sb, Collection<Xref> xrefs) {
List<Xref> sortedXrefs = new ArrayList<>(xrefs);
Collections.sort(sortedXrefs, XrefComparator.INSTANCE);
sb.append(" [");
Iterator<Xref> xrefsIterator = sortedXrefs.iterator();
while (xrefsIterator.hasNext()) {
Xref current = xrefsIterator.next();
String idref = current.getIdref();
int colonPos = idref.indexOf(':');
if (colonPos > 0) {
sb.append(escapeOboString(idref.substring(0, colonPos), EscapeMode.XREFLIST));
sb.append(':');
sb.append(escapeOboString(idref.substring(colonPos + 1), EscapeMode.XREFLIST));
} else {
sb.append(escapeOboString(idref, EscapeMode.XREFLIST));
}
String annotation = current.getAnnotation();
if (annotation != null) {
sb.append(' ');
sb.append('"');
sb.append(escapeOboString(annotation, EscapeMode.QUOTES));
sb.append('"');
}
if (xrefsIterator.hasNext()) {
sb.append(", ");
}
}
sb.append(']');
}
代码示例来源:origin: net.sourceforge.owlapi/owlapi-oboformat
private static void appendXrefs(StringBuilder sb, Collection<Xref> xrefs) {
List<Xref> sortedXrefs = new ArrayList<>(xrefs);
Collections.sort(sortedXrefs, XrefComparator.INSTANCE);
sb.append(" [");
Iterator<Xref> xrefsIterator = sortedXrefs.iterator();
while (xrefsIterator.hasNext()) {
Xref current = xrefsIterator.next();
String idref = current.getIdref();
int colonPos = idref.indexOf(':');
if (colonPos > 0) {
sb.append(escapeOboString(idref.substring(0, colonPos), EscapeMode.XREFLIST));
sb.append(':');
sb.append(escapeOboString(idref.substring(colonPos + 1), EscapeMode.XREFLIST));
} else {
sb.append(escapeOboString(idref, EscapeMode.XREFLIST));
}
String annotation = current.getAnnotation();
if (annotation != null) {
sb.append(' ');
sb.append('"');
sb.append(escapeOboString(annotation, EscapeMode.QUOTES));
sb.append('"');
}
if (xrefsIterator.hasNext()) {
sb.append(", ");
}
}
sb.append(']');
}
代码示例来源:origin: net.sourceforge.owlapi/oboformat-included-owlapi
private void appendXrefs(StringBuilder sb, Collection<Xref> xrefs) {
List<Xref> sortedXrefs = new ArrayList<Xref>(xrefs);
Collections.sort(sortedXrefs, XrefComparator.instance);
sb.append(" [");
Iterator<Xref> xrefsIterator = sortedXrefs.iterator();
while (xrefsIterator.hasNext()) {
final Xref current = xrefsIterator.next();
String idref = current.getIdref();
int colonPos = idref.indexOf(':');
if (colonPos > 0) {
sb.append(escapeOboString(idref.substring(0, colonPos), EscapeMode.xrefList));
sb.append(':');
sb.append(escapeOboString(idref.substring(colonPos + 1), EscapeMode.xrefList));
}
else {
sb.append(escapeOboString(idref, EscapeMode.xrefList));
}
String annotation = current.getAnnotation();
if (annotation != null) {
sb.append(' ');
sb.append('"');
sb.append(escapeOboString(annotation, EscapeMode.quotes));
sb.append('"');
}
if (xrefsIterator.hasNext()) {
sb.append(", ");
}
}
sb.append("]");
}
代码示例来源:origin: net.sourceforge.owlapi/owlapi-osgidistribution
private static void appendXrefs(StringBuilder sb, Collection<Xref> xrefs) {
List<Xref> sortedXrefs = new ArrayList<>(xrefs);
Collections.sort(sortedXrefs, XrefComparator.INSTANCE);
sb.append(" [");
Iterator<Xref> xrefsIterator = sortedXrefs.iterator();
while (xrefsIterator.hasNext()) {
Xref current = xrefsIterator.next();
String idref = current.getIdref();
int colonPos = idref.indexOf(':');
if (colonPos > 0) {
sb.append(escapeOboString(idref.substring(0, colonPos), EscapeMode.XREFLIST));
sb.append(':');
sb.append(escapeOboString(idref.substring(colonPos + 1), EscapeMode.XREFLIST));
} else {
sb.append(escapeOboString(idref, EscapeMode.XREFLIST));
}
String annotation = current.getAnnotation();
if (annotation != null) {
sb.append(' ');
sb.append('"');
sb.append(escapeOboString(annotation, EscapeMode.QUOTES));
sb.append('"');
}
if (xrefsIterator.hasNext()) {
sb.append(", ");
}
}
sb.append(']');
}
代码示例来源:origin: owlcs/owlapi
private static void writeXRefClause(Clause clause, Writer writer) throws IOException {
Xref xref = clause.getValue(Xref.class);
StringBuilder sb = new StringBuilder();
sb.append(clause.getTag());
sb.append(": ");
String idref = xref.getIdref();
int colonPos = idref.indexOf(':');
if (colonPos > 0) {
sb.append(escapeOboString(idref.substring(0, colonPos), EscapeMode.XREF));
sb.append(':');
sb.append(escapeOboString(idref.substring(colonPos + 1), EscapeMode.XREF));
} else {
sb.append(escapeOboString(idref, EscapeMode.XREF));
}
String annotation = xref.getAnnotation();
if (annotation != null) {
sb.append(" \"");
sb.append(escapeOboString(annotation, EscapeMode.QUOTES));
sb.append('"');
}
appendQualifiers(sb, clause);
writeLine(sb, writer);
}
代码示例来源:origin: net.sourceforge.owlapi/owlapi-distribution
private static void writeXRefClause(Clause clause, Writer writer) throws IOException {
Xref xref = clause.getValue(Xref.class);
StringBuilder sb = new StringBuilder();
sb.append(clause.getTag());
sb.append(": ");
String idref = xref.getIdref();
int colonPos = idref.indexOf(':');
if (colonPos > 0) {
sb.append(escapeOboString(idref.substring(0, colonPos), EscapeMode.XREF));
sb.append(':');
sb.append(escapeOboString(idref.substring(colonPos + 1), EscapeMode.XREF));
} else {
sb.append(escapeOboString(idref, EscapeMode.XREF));
}
String annotation = xref.getAnnotation();
if (annotation != null) {
sb.append(" \"");
sb.append(escapeOboString(annotation, EscapeMode.QUOTES));
sb.append('"');
}
appendQualifiers(sb, clause);
writeLine(sb, writer);
}
代码示例来源:origin: net.sourceforge.owlapi/owlapi-osgidistribution
private static void writeXRefClause(Clause clause, Writer writer) throws IOException {
Xref xref = clause.getValue(Xref.class);
StringBuilder sb = new StringBuilder();
sb.append(clause.getTag());
sb.append(": ");
String idref = xref.getIdref();
int colonPos = idref.indexOf(':');
if (colonPos > 0) {
sb.append(escapeOboString(idref.substring(0, colonPos), EscapeMode.XREF));
sb.append(':');
sb.append(escapeOboString(idref.substring(colonPos + 1), EscapeMode.XREF));
} else {
sb.append(escapeOboString(idref, EscapeMode.XREF));
}
String annotation = xref.getAnnotation();
if (annotation != null) {
sb.append(" \"");
sb.append(escapeOboString(annotation, EscapeMode.QUOTES));
sb.append('"');
}
appendQualifiers(sb, clause);
writeLine(sb, writer);
}
代码示例来源:origin: net.sourceforge.owlapi/owlapi-oboformat
private static void writeXRefClause(Clause clause, Writer writer) throws IOException {
Xref xref = clause.getValue(Xref.class);
StringBuilder sb = new StringBuilder();
sb.append(clause.getTag());
sb.append(": ");
String idref = xref.getIdref();
int colonPos = idref.indexOf(':');
if (colonPos > 0) {
sb.append(escapeOboString(idref.substring(0, colonPos), EscapeMode.XREF));
sb.append(':');
sb.append(escapeOboString(idref.substring(colonPos + 1), EscapeMode.XREF));
} else {
sb.append(escapeOboString(idref, EscapeMode.XREF));
}
String annotation = xref.getAnnotation();
if (annotation != null) {
sb.append(" \"");
sb.append(escapeOboString(annotation, EscapeMode.QUOTES));
sb.append('"');
}
appendQualifiers(sb, clause);
writeLine(sb, writer);
}
代码示例来源:origin: net.sourceforge.owlapi/oboformat-included-owlapi
private void writeXRefClause(Clause clause, BufferedWriter writer) throws IOException {
Xref xref = clause.getValue(Xref.class);
if (xref != null) {
StringBuilder sb = new StringBuilder();
sb.append(clause.getTag());
sb.append(": ");
if (xref.getIdref() != null) {
String idref = xref.getIdref();
int colonPos = idref.indexOf(':');
if (colonPos > 0) {
sb.append(escapeOboString(idref.substring(0, colonPos), EscapeMode.xref));
sb.append(':');
sb.append(escapeOboString(idref.substring(colonPos + 1), EscapeMode.xref));
}
else {
sb.append(escapeOboString(idref, EscapeMode.xref));
}
String annotation = xref.getAnnotation();
if (annotation != null) {
sb.append(" \"");
sb.append(escapeOboString(annotation, EscapeMode.quotes));
sb.append('"');
}
}
appendQualifiers(sb, clause);
writeLine(sb, writer);
}
}
代码示例来源:origin: owlcs/owlapi
private static List<Diff> getDiffsAsym(String ftype, Frame f1, Frame f2, int n) {
List<Diff> diffs = new ArrayList<>();
for (Clause c : f1.getClauses()) {
boolean isMatched = false;
for (Clause c2 : f2.getClauses()) {
if (sameTag(c, c2)) {
if (c.equals(c2)) {
isMatched = true;
if (OboFormatTag.TAG_XREF.getTag().equals(c.getTag())) {
String a1 = c.getValue(Xref.class).getAnnotation();
String a2 = c2.getValue(Xref.class).getAnnotation();
isMatched = a1 == null && a2 == null || a1 != null && a1.equals(a2);
}
break;
}
}
}
if (!isMatched) {
diffs.add(new Diff(ftype, "cannot_match_clause", f1, f2, c, n));
}
}
return diffs;
}
代码示例来源:origin: net.sourceforge.owlapi/owlapi-osgidistribution
private static List<Diff> getDiffsAsym(String ftype, Frame f1, Frame f2, int n) {
List<Diff> diffs = new ArrayList<>();
for (Clause c : f1.getClauses()) {
boolean isMatched = false;
for (Clause c2 : f2.getClauses()) {
if (sameTag(c, c2)) {
if (c.equals(c2)) {
isMatched = true;
if (OboFormatTag.TAG_XREF.getTag().equals(c.getTag())) {
String a1 = c.getValue(Xref.class).getAnnotation();
String a2 = c2.getValue(Xref.class).getAnnotation();
isMatched = a1 == null && a2 == null || a1 != null && a1.equals(a2);
}
break;
}
}
}
if (!isMatched) {
diffs.add(new Diff(ftype, "cannot_match_clause", f1, f2, c, n));
}
}
return diffs;
}
代码示例来源:origin: net.sourceforge.owlapi/owlapi-oboformat
private static List<Diff> getDiffsAsym(String ftype, Frame f1, Frame f2, int n) {
List<Diff> diffs = new ArrayList<>();
for (Clause c : f1.getClauses()) {
boolean isMatched = false;
for (Clause c2 : f2.getClauses()) {
if (sameTag(c, c2)) {
if (c.equals(c2)) {
isMatched = true;
if (OboFormatTag.TAG_XREF.getTag().equals(c.getTag())) {
String a1 = c.getValue(Xref.class).getAnnotation();
String a2 = c2.getValue(Xref.class).getAnnotation();
isMatched = a1 == null && a2 == null || a1 != null && a1.equals(a2);
}
break;
}
}
}
if (!isMatched) {
diffs.add(new Diff(ftype, "cannot_match_clause", f1, f2, c, n));
}
}
return diffs;
}
代码示例来源:origin: net.sourceforge.owlapi/owlapi-distribution
private static List<Diff> getDiffsAsym(String ftype, Frame f1, Frame f2, int n) {
List<Diff> diffs = new ArrayList<>();
for (Clause c : f1.getClauses()) {
boolean isMatched = false;
for (Clause c2 : f2.getClauses()) {
if (sameTag(c, c2)) {
if (c.equals(c2)) {
isMatched = true;
if (OboFormatTag.TAG_XREF.getTag().equals(c.getTag())) {
String a1 = c.getValue(Xref.class).getAnnotation();
String a2 = c2.getValue(Xref.class).getAnnotation();
isMatched = a1 == null && a2 == null || a1 != null && a1.equals(a2);
}
break;
}
}
}
if (!isMatched) {
diffs.add(new Diff(ftype, "cannot_match_clause", f1, f2, c, n));
}
}
return diffs;
}
代码示例来源:origin: net.sourceforge.owlapi/oboformat-included-owlapi
private List<Diff> getDiffsAsym(String ftype, Frame f1,
Frame f2, int n) {
List<Diff> diffs = new ArrayList<Diff>();
for (Clause c : f1.getClauses()) {
boolean isMatched = false;
for (Clause c2 : f2.getClauses()) {
if (c.getTag().equals(c2.getTag())) {
if (c.equals(c2)) {
isMatched = true;
if (OboFormatTag.TAG_XREF.getTag().equals(c.getTag())) {
String a1 = c.getValue(Xref.class).getAnnotation();
String a2 = c2.getValue(Xref.class).getAnnotation();
if (a1 != a2) {
isMatched = false;
if (a1 != null && a2 != null) {
isMatched = a1.equals(a2);
}
}
}
break;
}
}
}
if (!isMatched) {
diffs.add(new Diff(ftype, "cannot_match_clause", f1, f2, c, n));
}
}
return diffs;
}
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