r - data.table 在 R 中制作表的副本

Question

我正在这样做:

myfun <- function(inputvar_vec){
# inputvar_vec is input vector
# do something
# result = output vector
return(result)
}

DT[, result := lapply(.SD, myfun), by = byvar, .SDcols = inputvar]

我收到以下警告:

Warning message:
`In `[.data.table`(df1, , `:=`(prop, lapply(.SD, propEventInLastK)),  :
Invalid .internal.selfref detected and fixed by taking a copy of the whole table, 
so that     := can add this new column by reference. At an earlier point, this 
data.table has been copied by R (or been created manually using structure() 
or similar). (and then some more stuff) .... `

我的猜测是因为我在堆积 result向量(在 by 操作之后)，是否正在制作副本？

任何人都可以建议一种方法来消除此警告吗？我已经使用 apply 函数完成了这项工作，并认为它也应该在这里可以扩展。

我的另一个问题是:您能否从数据框中传递一大块行(通过使用 by 语句进行子集化)，然后调用函数 myfun 对其进行操作？

按要求添加示例

# generate data
N = 10000
default=NA
value = 1
df = data.table(id = sample(1:5000, N, replace=TRUE),
                trial = sample(c(0,1,2), N, replace=TRUE),
                ts = sample(1:200, N, replace=TRUE))

#set keys
setkeyv(df, c("id", "ts"))

df[["trial"]] = as.numeric(df[["trial"]]==value)

testfun <- function(x){
  L=length(x)
  x = x[L:1]
  x = fts(data=x)
  y = rep(default, L)
  if(L>=K){
    y1 = as.numeric(moving.sum(x,K))
    y = c(y1, rep(default,L-length(y1)))
  } 
  return(y[L:1]/K)
}

df[, prop:= lapply(.SD, testfun), by = id, .SDcols = "trial"]

仍然收到相同的警告消息:

Warning message:
In `[.data.table`(df, , `:=`(prop, lapply(.SD, testfun)), by = id,  :
  Invalid .internal.selfref detected and fixed by taking a copy of the whole table, so that := can add this new column by reference. At an earlier point, this data.table has been copied by R (or been created manually using structure() or similar). Avoid key<-, names<- and attr<- which in R currently (and oddly) may copy the whole data.table. Use set* syntax instead to avoid copying: setkey(), setnames() and setattr(). Also, list(DT1,DT2) will copy the entire DT1 and DT2 (R's list() copies named objects), use reflist() instead if needed (to be implemented). If this message doesn't help, please report to datatable-help so the root cause can be fixed.

Answer 1

问题出现在

df[["trial"]] = as.numeric(df[["trial"]]==value)

哪个不是 data.table方法

data.table 方法是使用 :=

 df[, trial := as.numeric(trial == value)]

应该避免这个问题。

了解为什么要制作副本(因此内部自引用可能无效)请参阅 Understanding exactly when a data.table is a reference to (vs a copy of) another data.table

重要的是要意识到没有 [[<- data.table 的方法s，因此 [[<-.data.frame被调用，这将复制整个对象，而且不会做任何小心的事情 data.table方法(例如 [<-.data.table )执行(返回有效的 data.table 。