r - 打开RStudio或R控制台时的警告消息

Question

最近，我在MacBook Pro(El Capitan 10.11.6)上安装了Microsoft R Open 3.3.1。当我打开RStudio或使用R控制台时，出现以下警告消息:

Warning message:
In doTryCatch(return(expr), name, parentenv, handler) :
  unable to load shared object '/Library/Frameworks/R.framework/Resources/modules//R_X11.so':
  dlopen(/Library/Frameworks/R.framework/Resources/modules//R_X11.so, 6): Symbol not found: _CGBitmapContextCreate
  Referenced from: /Library/Frameworks/R.framework/Resources/modules//R_X11.so
  Expected in: flat namespace
 in /Library/Frameworks/R.framework/Resources/modules//R_X11.so

您知道一种防止消息打印(或解决问题)的方法吗？

谢谢!

Answer 1

对于CRAN R安装，我看到R_X11.so引用以下库:

kevin@MBP:/Library/Frameworks/R.framework/Resources/modules
$ otool -L R_X11.so
R_X11.so:
        R_X11.so (compatibility version 0.0.0, current version 0.0.0)
        /opt/X11/lib/libSM.6.dylib (compatibility version 7.0.0, current version 7.1.0)
        /opt/X11/lib/libICE.6.dylib (compatibility version 10.0.0, current version 10.0.0)
        /usr/lib/libz.1.dylib (compatibility version 1.0.0, current version 1.2.5)
        /opt/X11/lib/libX11.6.dylib (compatibility version 10.0.0, current version 10.0.0)
        /opt/X11/lib/libXext.6.dylib (compatibility version 11.0.0, current version 11.0.0)
        /opt/X11/lib/libXrender.1.dylib (compatibility version 5.0.0, current version 5.0.0)
        /usr/lib/libxml2.2.dylib (compatibility version 10.0.0, current version 10.9.0)
        /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1197.1.1)
        /usr/lib/libbz2.1.0.dylib (compatibility version 1.0.0, current version 1.0.5)
        /opt/X11/lib/libXt.6.dylib (compatibility version 7.0.0, current version 7.0.0)
        /opt/X11/lib/libXmu.6.dylib (compatibility version 9.0.0, current version 9.0.0)
        /Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libR.dylib (compatibility version 3.3.0, current version 3.3.1)
        /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation (compatibility version 150.0.0, current version 855.17.0)

该库未引用您建议的符号:

kevin@MBP:/Library/Frameworks/R.framework/Resources/modules
$ nm R_X11.so | grep CGBitmap

但是，对于MRO安装，我看到以下库+符号:

kevin@MBP:/Volumes/Samsung 850 EVO/Library/Frameworks/R.framework/Resources/modules
$ otool -L R_X11.so
R_X11.so:
        R_X11.so (compatibility version 0.0.0, current version 0.0.0)
        /opt/X11/lib/libSM.6.dylib (compatibility version 7.0.0, current version 7.1.0)
        /opt/X11/lib/libICE.6.dylib (compatibility version 10.0.0, current version 10.0.0)
        /opt/X11/lib/libX11.6.dylib (compatibility version 10.0.0, current version 10.0.0)
        /opt/X11/lib/libXext.6.dylib (compatibility version 11.0.0, current version 11.0.0)
        /opt/X11/lib/libXrender.1.dylib (compatibility version 5.0.0, current version 5.0.0)
        /usr/lib/libexpat.1.dylib (compatibility version 7.0.0, current version 7.2.0)
        /opt/X11/lib/libXt.7.dylib (compatibility version 8.0.0, current version 8.0.0)
        /opt/X11/lib/libXmu.6.dylib (compatibility version 9.0.0, current version 9.0.0)
        /Library/Frameworks/R.framework/Versions/3.3.1-MRO/Resources/lib/libR.dylib (compatibility version 3.3.0, current version 3.3.1)
        /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation (compatibility version 150.0.0, current version 1255.1.0)
        /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1225.1.1)

带有引用符号:

kevin@MBP:/Volumes/Samsung 850 EVO/Library/Frameworks/R.framework/Resources/modules
$ nm R_X11.so | grep CGBitmap
                 U _CGBitmapContextCreate

这些符号通常由 CoreGraphics.framework提供:

kevin@MBP:/System/Library/Frameworks/CoreGraphics.framework/Versions/A
$ nm CoreGraphics | grep CGBitmapContext
0000000000046321 T _CGBitmapContextCreate
< ... other symbols ... >

但是，MRO生成的 R_X11.so没有链接到该链接，因此这些符号的查找失败。

TL；博士:Microsoft正在向您运送损坏的软件，该软件不包含提供所需符号的库的链接。请改用 CRAN-provided binaries of R。